Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s iron-sulfur cluster-binding protein | BV87_RS26435 | Not Available | Positive | 44430 - 44744 | 11159.2 |
| nad(p)/fad-dependent oxidoreductase | BV87_RS26440 | Not Available | Positive | 44851 - 46083 | 43888.8 |
| hypothetical protein | BV87_RS26445 | Not Available | Positive | 46319 - 46603 | 10656.6 |
| hypothetical protein | BV87_RS26450 | Not Available | Positive | 46614 - 47012 | 14865.8 |
| is66-like element accessory protein tnpa | BV87_RS26455 | Not Available | Positive | 47124 - 47522 | 14426.3 |
| is66 family insertion sequence element accessory protein tnpb | BV87_RS26460 | Not Available | Positive | 47576 - 47875 | 11135.8 |
| is66 family transposase zinc-finger binding domain-containing protein | BV87_RS26465 | Not Available | Positive | 47931 - 48818 | 33340.6 |
| hypothetical protein | BV87_RS26470 | Not Available | Negative | 48854 - 49699 | 30594.0 |
| dsba family protein | BV87_RS26475 | Not Available | Negative | 49765 - 50355 | 20927.0 |
| dsba family protein | BV87_RS26480 | Not Available | Negative | 50409 - 51038 | 22577.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
