Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | BV87_RS26330 | Not Available | Positive | 20650 - 22560 | 69641.0 |
| tonb-dependent receptor | BV87_RS26335 | Not Available | Positive | 22838 - 24886 | 72494.1 |
| is21-like element helper atpase istb | BV87_RS26340 | Not Available | Negative | 24956 - 25684 | 26643.3 |
| hypothetical protein | BV87_RS26345 | Not Available | Negative | 25671 - 26237 | 21087.1 |
| recombinase family protein | BV87_RS26350 | Not Available | Negative | 26275 - 26835 | 20737.3 |
| tn3 family transposase | BV87_RS26355 | Not Available | Positive | 26967 - 29981 | 111996.0 |
| alpha/beta fold hydrolase | BV87_RS26360 | Not Available | Positive | 30218 - 31402 | 44165.2 |
| serine hydrolase domain-containing protein | BV87_RS26365 | Not Available | Negative | 31491 - 32645 | 40656.3 |
| marr family winged helix-turn-helix transcriptional regulator | BV87_RS26370 | Not Available | Negative | 32903 - 33628 | 26618.2 |
| is21-like element isssp5 family helper atpase istb | BV87_RS26375 | Not Available | Negative | 33701 - 34468 | 28900.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
