Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | BV87_RS27085 | Not Available | Negative | 172434 - 172784 | 12931.5 |
| mfs transporter | BV87_RS27090 | Not Available | Negative | 172872 - 174056 | 40921.0 |
| metal-sensitive transcriptional regulator | BV87_RS28115 | Not Available | Positive | 174232 - 174432 | 7339.88 |
| efflux transporter outer membrane subunit | BV87_RS27100 | Not Available | Negative | 174392 - 175879 | 53894.1 |
| efflux rnd transporter periplasmic adaptor subunit | BV87_RS27105 | Not Available | Negative | 175888 - 176799 | 32844.7 |
| duf1656 domain-containing protein | BV87_RS27110 | Not Available | Negative | 176809 - 177000 | 6980.99 |
| fusc family protein | BV87_RS27115 | Not Available | Negative | 176997 - 179072 | 74183.0 |
| fadr/gntr family transcriptional regulator | BV87_RS27120 | Not Available | Positive | 179380 - 180075 | 25739.6 |
| exea family protein | BV87_RS27125 | Not Available | Negative | 180349 - 181320 | 35916.4 |
| integrase | BV87_RS27130 | Not Available | Negative | 181320 - 182981 | 62535.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
