Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | BV87_RS27040 | Not Available | Negative | 163064 - 165574 | 87065.4 |
| heavy-metal-associated domain-containing protein | BV87_RS27045 | Not Available | Positive | 165735 - 165953 | 7698.87 |
| duf305 domain-containing protein | BV87_RS27050 | Not Available | Positive | 165950 - 166252 | 11201.2 |
| hypothetical protein | BV87_RS27055 | Not Available | Positive | 166451 - 166681 | 8396.57 |
| short chain dehydrogenase | BV87_RS27060 | Not Available | Negative | 166782 - 167387 | 21344.9 |
| duf1349 domain-containing protein | BV87_RS27065 | Not Available | Negative | 167421 - 168104 | 25096.8 |
| tetr/acrr family transcriptional regulator | BV87_RS27070 | Not Available | Negative | 168136 - 168693 | 19575.3 |
| copper resistance system multicopper oxidase | BV87_RS27075 | Not Available | Positive | 168924 - 170756 | 66790.5 |
| hypothetical protein | BV87_RS27555 | Not Available | Positive | 170753 - 171064 | 10751.0 |
| copper resistance protein b | BV87_RS27080 | Not Available | Positive | 171061 - 172272 | 42568.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
