Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | BV87_RS26990 | Not Available | Negative | 151611 - 152816 | 44783.5 |
| nacht domain-containing protein | BV87_RS26995 | Not Available | Negative | 152932 - 157470 | 167648.0 |
| type ii toxin-antitoxin system vapc family toxin | BV87_RS27000 | Not Available | Negative | 157472 - 157861 | 13356.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | BV87_RS27005 | Not Available | Negative | 157858 - 158067 | 7342.7 |
| gnat family n-acetyltransferase | BV87_RS27010 | Not Available | Positive | 158322 - 158849 | 19762.8 |
| tyrosine-type recombinase/integrase | BV87_RS27015 | Not Available | Positive | 158846 - 159973 | 41156.4 |
| adp-ribosyltransferase | BV87_RS27020 | Not Available | Positive | 159970 - 160560 | 21379.3 |
| hypothetical protein | BV87_RS27025 | Not Available | Positive | 160557 - 161321 | 29096.7 |
| mfs transporter | BV87_RS27030 | Not Available | Negative | 161325 - 162497 | 39926.9 |
| cu(i)-responsive transcriptional regulator | BV87_RS27035 | Not Available | Negative | 162615 - 163067 | 16665.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
