Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trag n-terminal domain-containing protein | BV87_RS26940 | Not Available | Positive | 140913 - 143708 | 99147.6 |
| hypothetical protein | BV87_RS26945 | Not Available | Negative | 143711 - 143998 | 10629.8 |
| hypothetical protein | BV87_RS26950 | Not Available | Negative | 143970 - 144266 | 10747.7 |
| hypothetical protein | BV87_RS26955 | Not Available | Positive | 144635 - 145228 | 22087.1 |
| helix-turn-helix domain-containing protein | BV87_RS26960 | Not Available | Positive | 145254 - 146363 | 40737.2 |
| atp-dependent nuclease | BV87_RS26965 | Not Available | Positive | 146445 - 148394 | 71859.7 |
| uvrd-helicase domain-containing protein | BV87_RS26970 | Not Available | Positive | 148391 - 150040 | 60523.3 |
| hypothetical protein | BV87_RS26975 | Not Available | Negative | 150229 - 150693 | 17174.1 |
| hu family dna-binding protein | BV87_RS26980 | Not Available | Negative | 150741 - 151016 | 9286.02 |
| rlob domain-containing protein | BV87_RS26985 | Not Available | Negative | 151039 - 151614 | 20656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
