Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type-f conjugative transfer system protein trbi | BV87_RS26890 | Not Available | Positive | 132269 - 132922 | 22919.5 |
| s26 family signal peptidase | BV87_RS26895 | Not Available | Positive | 132906 - 133439 | 19255.5 |
| type-f conjugative transfer system protein traw | BV87_RS26900 | Not Available | Positive | 133436 - 134092 | 23991.0 |
| hypothetical protein | BV87_RS26905 | Not Available | Positive | 134092 - 134364 | 9907.42 |
| conjugal transfer pilus assembly protein trau | BV87_RS26910 | Not Available | Positive | 134361 - 135380 | 36666.7 |
| type-f conjugative transfer system pilin assembly protein trbc | BV87_RS26915 | Not Available | Positive | 135393 - 136133 | 25842.1 |
| conjugal transfer protein tran | BV87_RS26920 | Not Available | Positive | 136130 - 138001 | 67042.3 |
| hypothetical protein | BV87_RS26925 | Not Available | Positive | 137998 - 138417 | 14990.3 |
| conjugal transfer protein traf | BV87_RS26930 | Not Available | Positive | 138616 - 139434 | 30287.8 |
| conjugal transfer protein trah | BV87_RS26935 | Not Available | Positive | 139467 - 140897 | 50899.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
