Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BV87_RS26840 | Not Available | Negative | 123344 - 123748 | 15004.2 |
| hypothetical protein | BV87_RS26845 | Not Available | Positive | 124155 - 124475 | 10571.1 |
| type iv conjugative transfer system protein tral | BV87_RS26850 | Not Available | Positive | 124534 - 124824 | 10703.3 |
| type iv conjugative transfer system protein trae | BV87_RS26855 | Not Available | Positive | 124826 - 125392 | 21168.8 |
| type-f conjugative transfer system secretin trak | BV87_RS26860 | Not Available | Positive | 125389 - 126192 | 28238.9 |
| trab/virb10 family protein | BV87_RS26865 | Not Available | Positive | 126196 - 127521 | 46867.4 |
| dsbc family protein | BV87_RS26870 | Not Available | Positive | 127508 - 128410 | 31769.3 |
| trav family lipoprotein | BV87_RS26875 | Not Available | Positive | 128578 - 129342 | 25786.9 |
| type iv secretion system protein trac | BV87_RS26880 | Not Available | Positive | 129342 - 131933 | 95862.5 |
| hypothetical protein | BV87_RS26885 | Not Available | Positive | 131938 - 132276 | 12327.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
