Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium yanoikuyae |
| Strain | SHJ |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
36682 bp
Thymine Count
36288 bp
Guanine Count
58268 bp
Cytosine Count
57945 bp
Genome Length
189183 bp
Protein-coding Genes
189 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| res family nad+ phosphorylase | BV87_RS26790 | Not Available | Negative | 113160 - 113834 | 24027.3 |
| hypothetical protein | BV87_RS26795 | Not Available | Negative | 113834 - 114607 | 28089.4 |
| toprim domain-containing protein | BV87_RS26800 | Not Available | Negative | 114676 - 115542 | 31639.5 |
| hypothetical protein | BV87_RS26805 | Not Available | Negative | 115584 - 116093 | 18025.2 |
| para family protein | BV87_RS26810 | Not Available | Negative | 116090 - 116776 | 24157.8 |
| hypothetical protein | BV87_RS27805 | Not Available | Negative | 117295 - 118566 | 47113.5 |
| lytic transglycosylase domain-containing protein | BV87_RS26820 | Not Available | Positive | 118919 - 119611 | 24862.7 |
| replication initiator protein a | BV87_RS26825 | Not Available | Negative | 119612 - 120508 | 33962.6 |
| plasmid replication protein repc | BV87_RS26830 | Not Available | Negative | 120891 - 122162 | 46151.3 |
| helix-turn-helix transcriptional regulator | BV87_RS26835 | Not Available | Negative | 122675 - 123202 | 19563.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
