Gardnerella vaginalis

Gram-positiveRodNon-motileAnaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Gardnerella

Description

Gardnerella vaginalis is a gram-variable, rod-shaped bacterium that thrives in a temperature range of 25-37°C, falling under the category of mesophiles. Metabolically, it is a facultative anaerobe, meaning it can grow in the presence or absence of oxygen. It obtains energy through the fermentation of glycogen and other sugars, producing acetate and succinate as byproducts. This unique metabolism allows it to survive in a wide range of environments. Gardnerella vaginalis is a gram-variable organism, meaning it can exhibit both gram-positive and gram-negative staining properties depending on the conditions. Its rod-shaped morphology allows it to colonize the vaginal mucosa, where it can form biofilms and adhere to epithelial cells. As a facultative anaerobe, G. vaginalis can grow in the absence of oxygen, making it well-suited to thrive in the oxygen-poor environment of the vagina. However, it can also tolerate oxygen and even grows more rapidly in aerobic conditions. This ability to adapt to different oxygen levels allows it to colonize a wide range of body sites, including the vagina, cervix, and rectum. G. vaginalis has been implicated in various diseases, including bacterial vaginosis (BV), a common condition characterized by an overgrowth of anaerobic bacteria in the vagina. BV often manifests with symptoms such as itching, burning, and a strong, fishy odor. The presence of G. vaginalis in the vagina can also increase the risk of sexually transmitted infections (STIs) and premature labor in pregnant women. G. vaginalis has been identified as a pioneer species in the vaginal microbiome, playing a key role in shaping the community structure and function of this complex ecosystem. Despite its pathogenic potential, G. vaginalis is an integral part of the normal vaginal microbiota, and its presence can be beneficial in maintaining vaginal health. Further research into the ecology and behavior of G. vaginalis is crucial for developing effective treatments for BV and improving our understanding of the vaginal microbiome.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusGardnerella
SpeciesGardnerella vaginalis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Gardnerella vaginalis
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Gardnerella vaginalis strain GH021 scaffold6, whole genome shotgun

Gene Summary

Adenine Count

470433 bp

Thymine Count

470862 bp

Guanine Count

329825 bp

Cytosine Count

333666 bp

Genome Length

1760547 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna recombinaseCG394_00055Not AvailableNegative9350 - 95276852.18
transcriptional regulatorCG394_00060Not AvailablePositive9768 - 99687665.24
hypothetical proteinCG394_00065Not AvailablePositive9961 - 1041917725.7
restriction endonucleaseCG394_00070Not AvailableNegative10752 - 109005317.32
had family hydrolaseCG394_00075Not AvailableNegative11104 - 1194030670.6
preprotein translocase subunit secgCG394_00080Not AvailableNegative12071 - 123198677.24
triose-phosphate isomeraseCG394_00085Not AvailableNegative12379 - 1317628970.6
phosphoglycerate kinaseCG394_00090Not AvailableNegative13282 - 1424733347.6
phosphoglycerate kinaseCG394_00095Not AvailableNegative14436 - 145875498.86
dna-binding protein whiaCG394_00100Not AvailableNegative14977 - 1591533536.6

Displaying genes 11 – 20 of 2966 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001789(3R)-citramalateC5H6O5Chemical structure of (3R)-citramalateNot available
Average146.099Da
Monoisotopic146.0226205Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm0006172(R)-malyl-CoAC25H35N7O20P3SChemical structure of (R)-malyl-CoANot available
Average878.57Da
Monoisotopic878.089786623Da
BASm0008580carboxy-S-adenosyl-L-methionineC16H22N6O7SChemical structure of carboxy-S-adenosyl-L-methionineNot available
Average442.45Da
Monoisotopic442.1270682Da

Displaying 1–8 of 8 metabolites

Health Effects

Health ConditionRelationReference
Pyogenic osteomyelitisCausesPMC7852921
Bacterial vaginosisCausesPMC11597594
Bacterial vaginosisCausesPMC11782042
UtisCausesPMC11782042
Bacterial vaginosisCausesPMC12054147
BvCausesPMC12519793
BvCausesPMC12800088
Bacterial vaginosisCausesPMC13228082
BvCausesPMC13228082
Bacterial vaginosisCausesPMC12281154

Displaying health effects 1 – 10 of 11 in total