Xylella fastidiosa str. Hib4

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. Hib4 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an aerobic organism. This strain thrives optimally at a temperature of 26.0°C, suggesting a preference for moderate thermal conditions that may reflect its adaptation to specific host environments. The habitat of Xylella fastidiosa str. Hib4 is primarily host-associated, indicating its reliance on living hosts for survival and propagation. This relationship suggests that the bacterium may be adapted to colonize specific plant tissues, although the precise nature of these associations requires further investigation to elucidate its interactions with host plants. The aerobic nature of this bacterium implies that it utilizes oxygen for its metabolic processes, which may influence its distribution and ecological role in the environments it inhabits. Understanding the environmental conditions and host interactions of Xylella fastidiosa str. Hib4 could provide insights into its ecological niche and potential impacts on plant health. Further research into its physiological traits and environmental preferences may reveal important aspects of its biology and potential management strategies in agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainHib4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. Hib4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Xylella fastidiosa strain Hib4 plasmid pXF64-HB, complete

Gene Summary

Adenine Count

15190 bp

Thymine Count

15461 bp

Guanine Count

17297 bp

Cytosine Count

16303 bp

Genome Length

64251 bp

Protein-coding Genes

60 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
long-chain fatty acid--coa ligaseXFHB_RS01270Not AvailableNegative296128 - 29783763015.9
aconitate hydratase acnaXFHB_RS01280Not AvailableNegative299330 - 30205698615.5
abrb/maze/spovt family dna-binding domain-containing proteinXFHB_RS01285Not AvailablePositive302316 - 3025347827.58
type ii toxin-antitoxin system vapc family toxinXFHB_RS01290Not AvailablePositive302539 - 30293714642.9
bifunctional aconitate hydratase 2/2-methylisocitrate dehydrataseXFHB_RS01295Not AvailablePositive302990 - 30559393972.0
Trna-pheNot AvailableNot AvailablePositive305980 - 306055Not Available
m48 family metallopeptidaseXFHB_RS01305Not AvailableNegative306438 - 30678213217.2
filamentous hemagglutinin n-terminal domain-containing proteinXFHB_RS14435Not AvailableNegative306779 - 30940698582.0
hypothetical proteinXFHB_RS14680Not AvailableNegative309403 - 30972011323.4
restriction endonuclease subunit sXFHB_RS01325Not AvailableNegative309717 - 31101548193.5

Displaying genes 751 – 760 of 2688 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pierce's diseaseCausesPMC7009210
Grape pierce s disease (pd)CausesPMC8283493

Displaying health effects 1 – 2 of 2 in total