Xylella fastidiosa str. Hib4

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. Hib4 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an aerobic organism. This strain thrives optimally at a temperature of 26.0°C, suggesting a preference for moderate thermal conditions that may reflect its adaptation to specific host environments. The habitat of Xylella fastidiosa str. Hib4 is primarily host-associated, indicating its reliance on living hosts for survival and propagation. This relationship suggests that the bacterium may be adapted to colonize specific plant tissues, although the precise nature of these associations requires further investigation to elucidate its interactions with host plants. The aerobic nature of this bacterium implies that it utilizes oxygen for its metabolic processes, which may influence its distribution and ecological role in the environments it inhabits. Understanding the environmental conditions and host interactions of Xylella fastidiosa str. Hib4 could provide insights into its ecological niche and potential impacts on plant health. Further research into its physiological traits and environmental preferences may reveal important aspects of its biology and potential management strategies in agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainHib4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. Hib4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Xylella fastidiosa strain Hib4 plasmid pXF64-HB, complete

Gene Summary

Adenine Count

15190 bp

Thymine Count

15461 bp

Guanine Count

17297 bp

Cytosine Count

16303 bp

Genome Length

64251 bp

Protein-coding Genes

60 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail proteinXFHB_RS12335Not AvailableNegative2506328 - 250683718627.7
Contractile tail sheath proteinXFHB_RS12340Not AvailableNegative2506837 - 250801542116.9
Putative phage tail fiber proteinXFHB_RS12345Not AvailableNegative2508080 - 250967256646.7
Phage-related tail proteinXFHB_RS12350Not AvailableNegative2509680 - 251023720589.0
Phage-related baseplate assembly proteinXFHB_RS12355Not AvailableNegative2510230 - 251112332115.3
Phage-related baseplate assembly proteinXFHB_RS12360Not AvailableNegative2511123 - 251146112325.2
type ii toxin-antitoxin system relb/dinj family antitoxinXFHB_RS12365Not AvailablePositive2511611 - 25118749438.46
type ii toxin-antitoxin system yafq family toxinXFHB_RS12370Not AvailablePositive2511861 - 251214210873.9
Putative baseplate assembly protein vXFHB_RS12375Not AvailableNegative2512188 - 251277520406.2
Putative minor tail proteinXFHB_RS12380Not AvailableNegative2512772 - 251331420203.7

Displaying genes 461 – 470 of 2688 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pierce's diseaseCausesPMC7009210
Grape pierce s disease (pd)CausesPMC8283493

Displaying health effects 1 – 2 of 2 in total