Xylella fastidiosa str. Hib4

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. Hib4 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an aerobic organism. This strain thrives optimally at a temperature of 26.0°C, suggesting a preference for moderate thermal conditions that may reflect its adaptation to specific host environments. The habitat of Xylella fastidiosa str. Hib4 is primarily host-associated, indicating its reliance on living hosts for survival and propagation. This relationship suggests that the bacterium may be adapted to colonize specific plant tissues, although the precise nature of these associations requires further investigation to elucidate its interactions with host plants. The aerobic nature of this bacterium implies that it utilizes oxygen for its metabolic processes, which may influence its distribution and ecological role in the environments it inhabits. Understanding the environmental conditions and host interactions of Xylella fastidiosa str. Hib4 could provide insights into its ecological niche and potential impacts on plant health. Further research into its physiological traits and environmental preferences may reveal important aspects of its biology and potential management strategies in agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainHib4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. Hib4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Xylella fastidiosa strain Hib4 plasmid pXF64-HB, complete

Gene Summary

Adenine Count

15190 bp

Thymine Count

15461 bp

Guanine Count

17297 bp

Cytosine Count

16303 bp

Genome Length

64251 bp

Protein-coding Genes

60 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ygfz/gcvt domain-containing proteinXFHB_RS10820Not AvailablePositive2169732 - 217053528913.9
abc transporter atp-binding proteinXFHB_RS10825Not AvailableNegative2170680 - 217177439303.3
glucose-6-phosphate dehydrogenaseXFHB_RS10830Not AvailablePositive2172104 - 217353753319.9
glucokinaseXFHB_RS10835Not AvailablePositive2173534 - 217454736131.6
6-phosphogluconolactonaseXFHB_RS10840Not AvailablePositive2174544 - 217526326356.9
phosphogluconate dehydrataseXFHB_RS10845Not AvailablePositive2175403 - 217729566854.0
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseXFHB_RS10850Not AvailablePositive2177406 - 217806523082.1
Trna-alaNot AvailableNot AvailablePositive2178319 - 2178394Not Available
Trna-gluNot AvailableNot AvailablePositive2178448 - 2178523Not Available
Trna-leuNot AvailableNot AvailablePositive2178652 - 2178738Not Available

Displaying genes 2201 – 2210 of 2688 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pierce's diseaseCausesPMC7009210
Grape pierce s disease (pd)CausesPMC8283493

Displaying health effects 1 – 2 of 2 in total