Xylella fastidiosa str. Hib4

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. Hib4 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an aerobic organism. This strain thrives optimally at a temperature of 26.0°C, suggesting a preference for moderate thermal conditions that may reflect its adaptation to specific host environments. The habitat of Xylella fastidiosa str. Hib4 is primarily host-associated, indicating its reliance on living hosts for survival and propagation. This relationship suggests that the bacterium may be adapted to colonize specific plant tissues, although the precise nature of these associations requires further investigation to elucidate its interactions with host plants. The aerobic nature of this bacterium implies that it utilizes oxygen for its metabolic processes, which may influence its distribution and ecological role in the environments it inhabits. Understanding the environmental conditions and host interactions of Xylella fastidiosa str. Hib4 could provide insights into its ecological niche and potential impacts on plant health. Further research into its physiological traits and environmental preferences may reveal important aspects of its biology and potential management strategies in agricultural contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainHib4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. Hib4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Xylella fastidiosa strain Hib4 plasmid pXF64-HB, complete

Gene Summary

Adenine Count

15190 bp

Thymine Count

15461 bp

Guanine Count

17297 bp

Cytosine Count

16303 bp

Genome Length

64251 bp

Protein-coding Genes

60 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
noti family restriction endonucleaseXFHB_RS02800Not AvailableNegative606989 - 60784031627.3
dna-methyltransferaseXFHB_RS02805Not AvailableNegative607837 - 60897941940.9
Trna-serNot AvailableNot AvailablePositive609045 - 609132Not Available
fkbp-type peptidyl-prolyl cis-trans isomerase n-terminal domain-containing proteinXFHB_RS02815Not AvailableNegative610077 - 61077525097.2
hypothetical proteinXFHB_RS02820Not AvailablePositive611396 - 61176113417.5
endonuclease iiiXFHB_RS02825Not AvailablePositive611758 - 61244425139.8
rhomboid family intramembrane serine proteaseXFHB_RS02835Not AvailableNegative612764 - 61342624461.9
duf418 domain-containing proteinXFHB_RS02840Not AvailableNegative613884 - 61513446586.7
peptidylprolyl isomeraseXFHB_RS02845Not AvailableNegative615197 - 61567617518.9
c40 family peptidaseXFHB_RS02850Not AvailablePositive615712 - 61634122861.6

Displaying genes 1001 – 1010 of 2688 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Pierce's diseaseCausesPMC7009210
Grape pierce s disease (pd)CausesPMC8283493

Displaying health effects 1 – 2 of 2 in total