Xylella fastidiosa str. CO33

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. CO33 is a Gram-negative, rod-shaped bacterium that typically exists in a single-cell arrangement. This microbe thrives in host-associated habitats and exhibits an optimal growth temperature of 26.0°C, indicating a preference for moderate environmental conditions. As an aerobe, Xylella fastidiosa str. CO33 requires oxygen for its metabolic processes, which is essential for its survival and proliferation in its ecological niches. The bacterium has garnered attention due to its association with various plant hosts, where it may play a role in influencing plant health and disease dynamics. The specific interactions between Xylella fastidiosa str. CO33 and its plant hosts are an area of ongoing research, particularly in understanding its ecological implications and potential agricultural impacts. Importantly, the ability of Xylella fastidiosa str. CO33 to thrive in oxygen-rich environments may suggest adaptations that enable it to establish itself within the vascular systems of plants, where it can access nutrients while also being influenced by the host's physiological responses. This interplay highlights the complex relationships that can exist between microbial inhabitants and their host organisms, underscoring the need for further studies to elucidate the functional roles of this bacterium in its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. CO33
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylella fastidiosa str. CO33

Accession NumberLJZW00000000.1

Gene Summary

Adenine Count

632130 bp

Thymine Count

663261 bp

Guanine Count

708090 bp

Cytosine Count

678403 bp

Genome Length

2681926 bp

Protein-coding Genes

2100 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Gp45AOT81_02200Not Available-549552 - 55105451402.6
Gp44AOT81_02205Not Available-551051 - 55183327381.3
Inner membrane proteinAOT81_02210Not Available+551870 - 5521249065.58
Dna injection proteinAOT81_02215Not Available-552121 - 55344045510.9
Dna injection proteinAOT81_02220Not Available-553878 - 55508943391.3
Dna injection proteinAOT81_02225Not Available-555093 - 55580025125.6
Gp37AOT81_02230Not Available-555831 - 5560769061.09
Head completion proteinAOT81_02235Not Available-556046 - 55797469779.9
Dna stabilization proteinAOT81_02240Not Available-557971 - 55837814655.3
Capsid proteinAOT81_02245Not Available-558399 - 55962543730.0

Displaying genes 1 – 10 of 2283 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

223 records
Metabolite IDMetabolite nameStructureCAS number
BASm0005086D-galactosamine 6-phosphateC6H14NO8PChemical structure of D-galactosamine 6-phosphate3616-42-0
Average259.151Da
Monoisotopic259.0457029Da
BASm0005091(4S)-4-hydroxy-2-oxoglutarateC5H4O6Chemical structure of (4S)-4-hydroxy-2-oxoglutarateNot available
Average160.082Da
Monoisotopic160.001885009Da
BASm0005236O-ureido-L-serineC4H9N3O4Chemical structure of O-ureido-L-serineNot available
Average163.133Da
Monoisotopic163.059305782Da
BASm00054871-(9Z-octadecenoyl)-sn-glycero-3-phosphateC21H39O7PChemical structure of 1-(9Z-octadecenoyl)-sn-glycero-3-phosphateNot available
Average434.511Da
Monoisotopic434.244437754Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm00055344-methylpentanoateC6H11O2Chemical structure of 4-methylpentanoateNot available
Average115.153Da
Monoisotopic115.0764532Da
BASm00063042-iminoacetateC2H3NO2Chemical structure of 2-iminoacetateNot available
Average73.0507Da
Monoisotopic73.01637835Da
BASm0006661UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamineC43H75N3O20P2Chemical structure of UDP-2-N,3-O-bis[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamineNot available
Average1016.0112Da
Monoisotopic1015.441915Da
BASm0007001UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateC28H39N5O23P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamateNot available
Average875.582Da
Monoisotopic875.1533009Da
BASm0007003UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateC35H51N7O26P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioateNot available
Average1047.7583Da
Monoisotopic1047.235898Da

Displaying 101–110 of 223 metabolites