Xylella fastidiosa str. CO33

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. CO33 is a Gram-negative, rod-shaped bacterium that typically exists in a single-cell arrangement. This microbe thrives in host-associated habitats and exhibits an optimal growth temperature of 26.0°C, indicating a preference for moderate environmental conditions. As an aerobe, Xylella fastidiosa str. CO33 requires oxygen for its metabolic processes, which is essential for its survival and proliferation in its ecological niches. The bacterium has garnered attention due to its association with various plant hosts, where it may play a role in influencing plant health and disease dynamics. The specific interactions between Xylella fastidiosa str. CO33 and its plant hosts are an area of ongoing research, particularly in understanding its ecological implications and potential agricultural impacts. Importantly, the ability of Xylella fastidiosa str. CO33 to thrive in oxygen-rich environments may suggest adaptations that enable it to establish itself within the vascular systems of plants, where it can access nutrients while also being influenced by the host's physiological responses. This interplay highlights the complex relationships that can exist between microbial inhabitants and their host organisms, underscoring the need for further studies to elucidate the functional roles of this bacterium in its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. CO33
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylella fastidiosa str. CO33

Accession NumberLJZW00000000.1

Gene Summary

Adenine Count

632130 bp

Thymine Count

663261 bp

Guanine Count

708090 bp

Cytosine Count

678403 bp

Genome Length

2681926 bp

Protein-coding Genes

2100 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Cyanobacterial phosphoribosylglycinamide formyltransferaseAOT81_07295Q46339+1711262 - 171211332169.8
AttlNot AvailableNot Available+1712156 - 1712168Not Available
Hypothetical proteinAOT81_07300Not Available+1712473 - 171291316445.8
ferrous iron transporter bAOT81_07305P19528-1713009 - 171355119561.7
Gp45AOT81_07310Not Available-1713791 - 171414412313.5
Gp44AOT81_07315Not Available-1714141 - 171492327322.3
Dna injection proteinAOT81_07320Not Available-1714957 - 171622844645.1
Dna injection proteinAOT81_07325Not Available-1716669 - 171788043924.8
Dna injection proteinAOT81_07330Not Available-1717884 - 171863926517.0
Gp37AOT81_07335Not Available-1718689 - 17189349185.28

Displaying genes 41 – 50 of 2283 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

223 records
Metabolite IDMetabolite nameStructureCAS number
BASm00103213',3'-cUAMPC19H21N7O14P2Chemical structure of 3',3'-cUAMPNot available
Average633.361Da
Monoisotopic633.06326954Da
BASm00103223',3',3'-cAAGC30H33N15O19P3Chemical structure of 3',3',3'-cAAGNot available
Average1000.603Da
Monoisotopic1000.130645636Da
BASm00107383-phosphoshikimateC7H8O8PChemical structure of 3-phosphoshikimateNot available
Average251.108Da
Monoisotopic250.997324955Da
BASm0010825N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamideC8H13N2O9PChemical structure of N(2)-formyl-N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average312.172Da
Monoisotopic312.0369642Da
BASm00108262-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidineC8H15N3O8PChemical structure of 2-formamido-N(1)-(5-O-phospho-beta-D-ribosyl)acetamidineNot available
Average312.195Da
Monoisotopic312.060225Da
BASm0010884(7R,8S)-7,8-diammoniononanoateC9H21N2O2Chemical structure of (7R,8S)-7,8-diammoniononanoateNot available
Average189.278Da
Monoisotopic189.1597543Da
BASm0010887(4R,5S)-dethiobiotinC10H18N2O3Chemical structure of (4R,5S)-dethiobiotin533-48-2
Average214.2615Da
Monoisotopic214.1317425Da
BASm0011145(3Z,5E)-dodecadienoyl-CoAC33H50N7O17P3SChemical structure of (3Z,5E)-dodecadienoyl-CoANot available
Average941.78Da
Monoisotopic941.221869666Da
BASm0011146(3Z,5E)-dodecadienoateC12H19O2Chemical structure of (3Z,5E)-dodecadienoateNot available
Average195.283Da
Monoisotopic195.139053432Da
BASm00111563-hydroxydodecanoyl-CoAC33H54N7O18P3SChemical structure of 3-hydroxydodecanoyl-CoANot available
Average961.81Da
Monoisotopic961.248084414Da

Displaying 131–140 of 223 metabolites