Xylella fastidiosa str. CO33

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. CO33 is a Gram-negative, rod-shaped bacterium that typically exists in a single-cell arrangement. This microbe thrives in host-associated habitats and exhibits an optimal growth temperature of 26.0°C, indicating a preference for moderate environmental conditions. As an aerobe, Xylella fastidiosa str. CO33 requires oxygen for its metabolic processes, which is essential for its survival and proliferation in its ecological niches. The bacterium has garnered attention due to its association with various plant hosts, where it may play a role in influencing plant health and disease dynamics. The specific interactions between Xylella fastidiosa str. CO33 and its plant hosts are an area of ongoing research, particularly in understanding its ecological implications and potential agricultural impacts. Importantly, the ability of Xylella fastidiosa str. CO33 to thrive in oxygen-rich environments may suggest adaptations that enable it to establish itself within the vascular systems of plants, where it can access nutrients while also being influenced by the host's physiological responses. This interplay highlights the complex relationships that can exist between microbial inhabitants and their host organisms, underscoring the need for further studies to elucidate the functional roles of this bacterium in its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. CO33
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylella fastidiosa str. CO33

Accession NumberLJZW00000000.1

Gene Summary

Adenine Count

632130 bp

Thymine Count

663261 bp

Guanine Count

708090 bp

Cytosine Count

678403 bp

Genome Length

2681926 bp

Protein-coding Genes

2100 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
dna-binding proteinAOT81_11910Q46560+2657164 - 265745710897.2
hypothetical proteinAOT81_11920Not Available-2657658 - 26579189385.45
peptidase s24AOT81_11925Not Available+2658003 - 265876128082.6
hypothetical proteinAOT81_11935Not Available+2659294 - 265989021937.5
hypothetical proteinAOT81_11940Not Available-2660451 - 266076511145.6
transcriptional regulatorAOT81_11950Not Available+2661361 - 266163310493.6
transcriptional regulatorAOT81_11955Not Available+2661630 - 266203414700.9
hypothetical proteinAOT81_11960Not Available-2662514 - 266283712148.8
hypothetical proteinAOT81_11965Not Available-2662824 - 26630638861.25
hypothetical proteinAOT81_11970Not Available+2663250 - 266357612375.9

Displaying genes 2261 – 2270 of 2283 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

223 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003983di-trans,octa-cis-undecaprenyl phosphateC55H89O4PChemical structure of di-trans,octa-cis-undecaprenyl phosphateNot available
Average845.288Da
Monoisotopic844.6509455Da
BASm0003997Fe(II)-heme oC49H56FeN4O5Chemical structure of Fe(II)-heme oNot available
Average836.856Da
Monoisotopic836.361104Da
BASm0004072alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateC61H100O12P2Chemical structure of alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1087.408Da
Monoisotopic1086.6701Da
BASm0004092UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC41H61N9O28P2Chemical structure of UDP-N-acetyl-alpha-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1189.924Da
Monoisotopic1189.312320676Da
BASm0004093di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineC87H139N7O23P2Chemical structure of di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanineNot available
Average1713.045Da
Monoisotopic1711.941952079Da
BASm0004099L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioateC15H25N4O8Chemical structure of L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioateNot available
Average389.386Da
Monoisotopic389.167787361Da
BASm0004172(R)-4'-phosphopantetheineC11H21N2O7PSChemical structure of (R)-4'-phosphopantetheineNot available
Average356.33Da
Monoisotopic356.081806356Da
BASm0004386N-acetyl-alpha-D-glucosaminyl-di-trans,octa-cis-undecaprenyl diphosphateC63H103NO12P2Chemical structure of N-acetyl-alpha-D-glucosaminyl-di-trans,octa-cis-undecaprenyl diphosphateNot available
Average1128.461Da
Monoisotopic1127.696649Da
BASm00044082-oxo-dAMPC10H14N5O7PChemical structure of 2-oxo-dAMPNot available
Average347.2212Da
Monoisotopic347.0630843Da
BASm0004531(6S)-NADHXC21H29N7O15P2Chemical structure of (6S)-NADHXNot available
Average681.446Da
Monoisotopic681.1207844Da

Displaying 81–90 of 223 metabolites