Xylella fastidiosa str. CO33

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Xylella

Description

Xylella fastidiosa str. CO33 is a Gram-negative, rod-shaped bacterium that typically exists in a single-cell arrangement. This microbe thrives in host-associated habitats and exhibits an optimal growth temperature of 26.0°C, indicating a preference for moderate environmental conditions. As an aerobe, Xylella fastidiosa str. CO33 requires oxygen for its metabolic processes, which is essential for its survival and proliferation in its ecological niches. The bacterium has garnered attention due to its association with various plant hosts, where it may play a role in influencing plant health and disease dynamics. The specific interactions between Xylella fastidiosa str. CO33 and its plant hosts are an area of ongoing research, particularly in understanding its ecological implications and potential agricultural impacts. Importantly, the ability of Xylella fastidiosa str. CO33 to thrive in oxygen-rich environments may suggest adaptations that enable it to establish itself within the vascular systems of plants, where it can access nutrients while also being influenced by the host's physiological responses. This interplay highlights the complex relationships that can exist between microbial inhabitants and their host organisms, underscoring the need for further studies to elucidate the functional roles of this bacterium in its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusXylella
SpeciesXylella fastidiosa
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Xylella fastidiosa str. CO33
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature26
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Xylella fastidiosa str. CO33

Accession NumberLJZW00000000.1

Gene Summary

Adenine Count

632130 bp

Thymine Count

663261 bp

Guanine Count

708090 bp

Cytosine Count

678403 bp

Genome Length

2681926 bp

Protein-coding Genes

2100 genes

Non-Coding Genes

183 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Scaffold proteinAOT81_02250Not Available-559673 - 56052731701.4
Portal proteinAOT81_02255Not Available-560529 - 56260176849.0
TerlAOT81_02260P26745-562604 - 56401953756.9
Gp30AOT81_02265Not Available-563928 - 56425411541.7
Gp29AOT81_02270Not Available-564254 - 56456811493.9
hypotheticalAOT81_02275Not Available-564580 - 56490611992.7
HolinAOT81_02280Not Available-564896 - 56520711191.7
Putative endolysin/autolysinAOT81_02285Not Available-565218 - 56571818578.4
Dna methylaseAOT81_02290Not Available-565820 - 56655126844.3
Gp24AOT81_02295Not Available-566640 - 56736226472.9

Displaying genes 11 – 20 of 2283 in total

Pathways

22 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

223 records
Metabolite IDMetabolite nameStructureCAS number
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da
BASm0003537(R)-3-hydroxy-2-oxo-4-phosphooxybutanoateC4H4O8PChemical structure of (R)-3-hydroxy-2-oxo-4-phosphooxybutanoateNot available
Average211.043Da
Monoisotopic210.9660248Da
BASm0003657N-acetyl-D-muramate 6-phosphateC11H17NO11PChemical structure of N-acetyl-D-muramate 6-phosphateNot available
Average370.228Da
Monoisotopic370.0555681Da
BASm0003694N(2)-acetyl-L-citrullineC8H14N3O4Chemical structure of N(2)-acetyl-L-citrullineNot available
Average216.218Da
Monoisotopic216.098979523Da
BASm0003701L-methionine (S)-S-oxideC5H11NO3SChemical structure of L-methionine (S)-S-oxide62697-73-8
Average165.21Da
Monoisotopic165.045964392Da
BASm0003763(1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateC11H12NO6PChemical structure of (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphateNot available
Average285.1898Da
Monoisotopic285.0402236Da
BASm00037962-methyl-trans-aconitateC7H5O6Chemical structure of 2-methyl-trans-aconitateNot available
Average185.113Da
Monoisotopic185.0102586Da
BASm0003841N-[(R)-4-phosphopantothenoyl]-L-cysteineC12H20N2O9PSChemical structure of N-[(R)-4-phosphopantothenoyl]-L-cysteineNot available
Average399.33Da
Monoisotopic399.064359144Da
BASm0003926sirohemeC42H36FeN4O16Not available52553-42-1
Average908.611Da
Monoisotopic908.151956Da
BASm0003971heme bC34H30FeN4O4Not available14875-96-8
Average614.484Da
Monoisotopic614.162739Da

Displaying 71–80 of 223 metabolites