Spiroplasma clarkii str. CN-5

microaerophile

Kingdom

Bacillati

Phylum

Mycoplasmatota

Class

Mollicutes

Order

Entomoplasmatales

Family

Spiroplasmataceae

Genus

Spiroplasma

Description

Taxonomy

KingdomBacillati
PhylumMycoplasmatota
ClassMollicutes
OrderEntomoplasmatales
FamilySpiroplasmataceae
GenusSpiroplasma
SpeciesSpiroplasma clarkii
StrainCN-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Spiroplasma clarkii strain CN-5 chromosome, complete genome.

Gene Summary

Adenine Count

548452 bp

Thymine Count

550250 bp

Guanine Count

228355 bp

Cytosine Count

232950 bp

Genome Length

1560007 bp

Protein-coding Genes

1375 genes

Non-Coding Genes

38 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pts transporter subunit eiicSCLAR_RS00660Not AvailablePositive153974 - 15554856985.4
sorbitol-6-phosphate dehydrogenaseSCLAR_RS00665Not AvailablePositive155554 - 15631227765.5
pts sugar transporter subunit iiaSCLAR_RS00670Not AvailablePositive156312 - 15672815622.8
hypothetical proteinSCLAR_RS00675Not AvailablePositive156728 - 15784042465.5
hypothetical proteinSCLAR_RS00680Not AvailablePositive158028 - 15872926119.6
hypothetical proteinSCLAR_RS00685Not AvailablePositive158642 - 15977843262.5
carbohydrate abc transporter permeaseSCLAR_RS00690Not AvailablePositive159762 - 16121954574.9
sugar abc transporter permeaseSCLAR_RS00695Not AvailablePositive161219 - 16219036213.7
hypothetical proteinSCLAR_RS00700Not AvailablePositive162194 - 16276322562.5
duf1189 family proteinSCLAR_RS00705Not AvailablePositive162876 - 16399144318.1

Displaying genes 131 – 140 of 1413 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

109 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00006473-hydroxypropanoateC3H5O3Chemical structure of 3-hydroxypropanoateNot available
Average89.071Da
Monoisotopic89.0244176Da
BASm00007164-methylsulfanyl-2-oxobutanoateC5H7O3SChemical structure of 4-methylsulfanyl-2-oxobutanoateNot available
Average147.17Da
Monoisotopic147.012138839Da
BASm0000976enol-oxaloacetateC4H2O5Chemical structure of enol-oxaloacetateNot available
Average130.056Da
Monoisotopic129.9913203Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 109 metabolites

Health Effects

No health effects information available for this bacterium.