Pimelobacter simplex

Rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Pimelobacter

Description

Pimelobacter simplex is a Gram-positive, rod-shaped bacterium that is nonsporulating and exhibits an aerobic metabolism. This microbe has been identified in a variety of environments, including deteriorated mural paintings, oil-contaminated soil, oil-contaminated sea sediment, and the rhizosphere and roots of pine trees. Its presence in these diverse habitats suggests a notable adaptability to different ecological niches, particularly those affected by organic contamination. The isolation of Pimelobacter simplex from oil-contaminated environments indicates a potential role in the degradation of hydrocarbons, which may contribute to bioremediation efforts in polluted sites. Furthermore, its association with the rhizosphere of pine trees highlights its possible involvement in plant-microbe interactions, potentially influencing nutrient cycling or soil health. This dual capacity to thrive in both contaminated and natural environments underscores the ecological versatility of Pimelobacter simplex, making it an interesting subject for further study in microbial ecology and environmental microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusPimelobacter
SpeciesPimelobacter simplex
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdeteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil
Biotic relationshipNot Available
Host(s)Homo sapiens, Triticum aestivum, Solanum lycopersicum
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pimelobacter simplex strain ATCC 6946 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

5428 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phospholipid/cholesterol/gamma-hch transport system permease proteinSAMN05421671_5545Not AvailablePositive5518003 - 551883028976.8
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN05421671_5546Not AvailablePositive5518838 - 552009744953.8
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN05421671_5547Not AvailablePositive5520094 - 552115238273.9
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN05421671_5548Not AvailablePositive5521152 - 552212334648.4
virulence factor mce family proteinSAMN05421671_5549Not AvailablePositive5522120 - 552325640461.0
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN05421671_5550Not AvailablePositive5523253 - 552472251469.6
phospholipid/cholesterol/gamma-hch transport system substrate-binding proteinSAMN05421671_5551Not AvailablePositive5524719 - 552600545792.4
hypothetical proteinSAMN05421671_5552Not AvailablePositive5526002 - 552670024305.7
mce-associated membrane proteinSAMN05421671_5553Not AvailablePositive5526700 - 552753629764.8
dna-directed rna polymerase subunit betaSAMN05421671_5554Not AvailablePositive5527835 - 5531317129115.0

Displaying genes 5481 – 5490 of 5564 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

3 records
Metabolite IDMetabolite nameStructureCAS number
BASm00174922-MaleylacetateC6H6O5Chemical structure of 2-Maleylacetate24740-88-3
Average158.1088Da
Monoisotopic158.021523302Da
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0040654Streptomyces bungoensisNot availableNot availableNot available

Displaying 1–3 of 3 metabolites

Health Effects

Health ConditionRelationReference
PyonephrosisCausesPMC11729731
Psoas abscessCausesPMC11729731

Displaying health effects 1 – 2 of 2 in total