Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline dehydrogenase/5-(hydroxymethyl)furfural/furfural oxidase | SAMN05421671_3863 | Not Available | Positive | 3844877 - 3846355 | 51745.2 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN05421671_3864 | Not Available | Positive | 3846339 - 3847661 | 46580.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421671_3865 | Not Available | Positive | 3847741 - 3848994 | 42921.1 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421671_3866 | Not Available | Positive | 3848991 - 3849740 | 26907.5 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421671_3867 | Not Available | Positive | 3849742 - 3850476 | 25818.4 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421671_3868 | Not Available | Positive | 3850473 - 3851348 | 30311.6 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421671_3869 | Not Available | Positive | 3851345 - 3852430 | 37573.4 |
| transcriptional regulator, rpir family | SAMN05421671_3870 | Not Available | Negative | 3852516 - 3853367 | 30432.4 |
| delta-1-pyrroline-5-carboxylate dehydrogenase | SAMN05421671_3871 | Not Available | Negative | 3853416 - 3855089 | 60088.0 |
| ornithine--oxo-acid transaminase | SAMN05421671_3872 | Not Available | Positive | 3855166 - 3856437 | 44448.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
