Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase, sigma subunit, ecf family | SAMN05421671_3702 | Not Available | Positive | 3682988 - 3683671 | 24096.5 |
| hypothetical protein | SAMN05421671_3703 | Not Available | Positive | 3683716 - 3684549 | 28060.7 |
| thioredoxin reductase (nadph) | SAMN05421671_3704 | Not Available | Positive | 3684628 - 3685617 | 34611.7 |
| thioredoxin | SAMN05421671_3705 | Not Available | Positive | 3685666 - 3685998 | 11976.3 |
| acetyltransferase (gnat) family protein | SAMN05421671_3706 | Not Available | Negative | 3686118 - 3686777 | 24237.3 |
| alanine-synthesizing transaminase | SAMN05421671_3707 | Not Available | Positive | 3686832 - 3688055 | 45131.0 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferases | SAMN05421671_3708 | Not Available | Positive | 3688096 - 3688872 | 28296.4 |
| chromosome partitioning protein, parb family | SAMN05421671_3709 | Not Available | Negative | 3689009 - 3690049 | 36720.6 |
| chromosome segregation atpase | SAMN05421671_3710 | Not Available | Negative | 3690046 - 3691197 | 39912.1 |
| 16s rrna m(7)g-527 methyltransferase | SAMN05421671_3711 | Not Available | Negative | 3691194 - 3691922 | 25600.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
