Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-like domain-containing protein | SAMN05421671_3682 | Not Available | Positive | 3659014 - 3660732 | 59015.4 |
| hypothetical protein | SAMN05421671_3683 | Not Available | Negative | 3660729 - 3661175 | 15528.2 |
| lipid ii:glycine glycyltransferase (peptidoglycan interpeptide bridge formation enzyme) | SAMN05421671_3684 | Not Available | Positive | 3661195 - 3662325 | 42004.9 |
| alanine racemase | SAMN05421671_3685 | Not Available | Positive | 3662327 - 3663403 | 38988.9 |
| hypothetical protein | SAMN05421671_3686 | Not Available | Negative | 3663421 - 3663894 | 16400.4 |
| uncharacterized membrane protein | SAMN05421671_3687 | Not Available | Negative | 3663894 - 3665306 | 52047.4 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN05421671_3688 | Not Available | Negative | 3665310 - 3667613 | 82316.7 |
| rna polymerase sigma-70 factor, sigma-e family | SAMN05421671_3689 | Not Available | Negative | 3667638 - 3668126 | 18120.7 |
| hypothetical protein | SAMN05421671_3690 | Not Available | Negative | 3668123 - 3669004 | 30478.7 |
| transcriptional regulator, padr family | SAMN05421671_3691 | Not Available | Positive | 3669109 - 3669696 | 22185.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
