Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dihydroxybiphenyl 1,2-dioxygenase | SAMN05421671_3602 | Not Available | Negative | 3584483 - 3585415 | 33789.7 |
| acyl-coa dehydrogenase | SAMN05421671_3603 | Not Available | Negative | 3585435 - 3586619 | 42422.3 |
| dna-binding transcriptional regulator, marr family | SAMN05421671_3604 | Not Available | Positive | 3586821 - 3587813 | 36433.4 |
| transcriptional regulator, iclr family | SAMN05421671_3605 | Not Available | Positive | 3588072 - 3588890 | 28826.9 |
| predicted oxidoreductase | SAMN05421671_3606 | Not Available | Positive | 3589014 - 3590561 | 54333.6 |
| steroid delta-isomerase | SAMN05421671_3607 | Not Available | Positive | 3590558 - 3590929 | 12678.0 |
| succinate dehydrogenase/fumarate reductase, flavoprotein subunit | SAMN05421671_3608 | Not Available | Negative | 3591042 - 3592700 | 58759.7 |
| transcriptional regulator, tetr family | SAMN05421671_3609 | Not Available | Positive | 3592798 - 3593385 | 20658.5 |
| hypothetical protein | SAMN05421671_3610 | Not Available | Positive | 3593432 - 3593947 | 17846.1 |
| protein of unknown function | SAMN05421671_3611 | Not Available | Negative | 3593960 - 3594187 | 8108.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
