Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN05421671_3512 | Not Available | Positive | 3504241 - 3505494 | 41610.2 |
| beta-glucanase, gh16 family | SAMN05421671_3513 | Not Available | Positive | 3505692 - 3506879 | 43461.2 |
| glycosyl hydrolases family 16 | SAMN05421671_3514 | Not Available | Positive | 3507039 - 3507968 | 33636.3 |
| exodeoxyribonuclease-3 | SAMN05421671_3515 | Not Available | Negative | 3507973 - 3508845 | 31960.8 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421671_3516 | Not Available | Negative | 3508871 - 3509845 | 34097.2 |
| uncharacterized protein | SAMN05421671_3517 | Not Available | Negative | 3509919 - 3510479 | 20997.1 |
| lysozyme | SAMN05421671_3518 | Not Available | Positive | 3510539 - 3511270 | 26197.0 |
| thioredoxin | SAMN05421671_3519 | Not Available | Positive | 3511273 - 3511626 | 12409.6 |
| probable oxidoreductase, llm family | SAMN05421671_3520 | Not Available | Positive | 3511619 - 3512680 | 38612.6 |
| transcriptional regulator, tetr family | SAMN05421671_3521 | Not Available | Negative | 3512670 - 3513293 | 21968.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
