Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system permease protein | SAMN05421671_3401 | Not Available | Positive | 3389273 - 3390307 | 35260.2 |
| iron complex transport system atp-binding protein | SAMN05421671_3402 | Not Available | Positive | 3390304 - 3391092 | 27772.6 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | SAMN05421671_3403 | Not Available | Positive | 3391144 - 3392529 | 48811.2 |
| peptidase family m28 | SAMN05421671_3404 | Not Available | Negative | 3392518 - 3393450 | 32503.6 |
| rna polymerase, sigma 70 subunit, rpod | SAMN05421671_3405 | Not Available | Negative | 3393463 - 3394974 | 53994.7 |
| uncharacterized hhh-gpd family protein | SAMN05421671_3406 | Not Available | Negative | 3395126 - 3395701 | 20416.5 |
| major facilitator superfamily protein | SAMN05421671_3407 | Not Available | Negative | 3395656 - 3396894 | 40502.0 |
| transcriptional regulator, tetr family | SAMN05421671_3408 | Not Available | Negative | 3396968 - 3397579 | 21501.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421671_3409 | Not Available | Positive | 3397664 - 3398527 | 30050.8 |
| 2,4-dienoyl-coa reductase | SAMN05421671_3410 | Not Available | Positive | 3398524 - 3399768 | 44233.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
