Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | SAMN05421671_3291 | Not Available | Negative | 3256817 - 3257281 | 16885.5 |
| spermidine/putrescine transport system substrate-binding protein | SAMN05421671_3292 | Not Available | Positive | 3257445 - 3258608 | 42909.7 |
| spermidine/putrescine transport system atp-binding protein | SAMN05421671_3293 | Not Available | Positive | 3258592 - 3259737 | 41471.8 |
| spermidine/putrescine transport system permease protein | SAMN05421671_3294 | Not Available | Positive | 3259737 - 3260585 | 30755.1 |
| spermidine/putrescine transport system permease protein | SAMN05421671_3295 | Not Available | Positive | 3260582 - 3261400 | 29162.4 |
| hypothetical protein | SAMN05421671_3296 | Not Available | Negative | 3261397 - 3262137 | 25567.7 |
| lpxtg-motif cell wall anchor domain-containing protein | SAMN05421671_3297 | Not Available | Negative | 3262134 - 3268166 | 207047.0 |
| hypothetical protein | SAMN05421671_3298 | Not Available | Negative | 3268493 - 3269887 | 50609.8 |
| betaine-aldehyde dehydrogenase | SAMN05421671_3299 | Not Available | Positive | 3270010 - 3271449 | 50892.9 |
| saccharopine dehydrogenase, nadp-dependent | SAMN05421671_3300 | Not Available | Positive | 3271454 - 3272674 | 43863.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
