Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | SAMN05421671_3026 | Not Available | Negative | 3000412 - 3001512 | 37880.5 |
| shikimate kinase | SAMN05421671_3027 | Not Available | Negative | 3001509 - 3002045 | 18421.2 |
| chorismate synthase | SAMN05421671_3028 | Not Available | Negative | 3002042 - 3003220 | 41528.5 |
| leader peptidase (prepilin peptidase) / n-methyltransferase | SAMN05421671_3029 | Not Available | Negative | 3003244 - 3003969 | 24584.9 |
| shikimate dehydrogenase | SAMN05421671_3030 | Not Available | Negative | 3003979 - 3004788 | 27195.5 |
| upf0755 protein | SAMN05421671_3031 | Not Available | Negative | 3004788 - 3005933 | 40788.3 |
| putative holliday junction resolvase | SAMN05421671_3032 | Not Available | Negative | 3005926 - 3006396 | 16764.3 |
| alanyl-trna synthetase | SAMN05421671_3033 | Not Available | Negative | 3006393 - 3009089 | 96958.6 |
| hypothetical protein | SAMN05421671_3034 | Not Available | Negative | 3009086 - 3009412 | 11623.6 |
| hypothetical protein | SAMN05421671_3035 | Not Available | Negative | 3009409 - 3009957 | 19910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
