Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | SAMN05421671_2895 | Not Available | Negative | 2877848 - 2879053 | 41087.8 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN05421671_2896 | Not Available | Negative | 2879080 - 2880072 | 34685.1 |
| hypothetical protein | SAMN05421671_2897 | Not Available | Negative | 2880173 - 2881159 | 35148.7 |
| conserved hypothetical protein, cofd-related | SAMN05421671_2898 | Not Available | Negative | 2881256 - 2882257 | 34688.2 |
| upf0042 nucleotide-binding protein | SAMN05421671_2899 | Not Available | Negative | 2882266 - 2883135 | 31674.9 |
| excinuclease abc subunit c | SAMN05421671_2900 | Not Available | Negative | 2883140 - 2885146 | 74416.0 |
| hypothetical protein | SAMN05421671_2901 | Not Available | Positive | 2885184 - 2886494 | 46842.6 |
| prolyl oligopeptidase family protein | SAMN05421671_2902 | Not Available | Positive | 2886491 - 2887273 | 26706.6 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN05421671_2903 | Not Available | Negative | 2887239 - 2887652 | 13497.1 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN05421671_2904 | Not Available | Negative | 2887645 - 2888139 | 15591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
