Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylornithine deacetylase | SAMN05421671_2885 | Not Available | Positive | 2865348 - 2866670 | 46239.8 |
| predicted amidohydrolase | SAMN05421671_2886 | Not Available | Positive | 2866667 - 2867833 | 42736.5 |
| transketolase | SAMN05421671_2887 | Not Available | Positive | 2867924 - 2870035 | 74929.1 |
| transaldolase | SAMN05421671_2888 | Not Available | Positive | 2870080 - 2871186 | 38693.6 |
| glucose-6-phosphate isomerase | SAMN05421671_2889 | Not Available | Positive | 2871191 - 2872867 | 60815.6 |
| 6-phosphogluconolactonase | SAMN05421671_2890 | Not Available | Positive | 2872864 - 2873607 | 25411.5 |
| sortase family protein | SAMN05421671_2891 | Not Available | Positive | 2873778 - 2876042 | 77895.5 |
| rna polymerase-binding protein | SAMN05421671_2892 | Not Available | Negative | 2876360 - 2876668 | 11272.3 |
| protein translocase subunit secg | SAMN05421671_2893 | Not Available | Negative | 2876783 - 2877019 | 8090.24 |
| triosephosphate isomerase | SAMN05421671_2894 | Not Available | Negative | 2877047 - 2877847 | 28050.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
