Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421671_2814 | Not Available | Positive | 2793970 - 2794755 | 27578.8 |
| hypothetical protein | SAMN05421671_2815 | Not Available | Positive | 2794925 - 2795398 | 16617.6 |
| hypothetical protein | SAMN05421671_2816 | Not Available | Negative | 2795570 - 2795995 | 15887.5 |
| hypothetical protein | SAMN05421671_2818 | Not Available | Negative | 2796884 - 2797264 | 12771.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421671_2819 | Not Available | Negative | 2797266 - 2798015 | 25221.9 |
| dna-binding transcriptional regulator, fadr family | SAMN05421671_2820 | Not Available | Negative | 2798067 - 2798699 | 21866.0 |
| transporter, uit1 family | SAMN05421671_2821 | Not Available | Positive | 2798819 - 2800171 | 46396.3 |
| 2'-5' rna ligase superfamily protein | SAMN05421671_2822 | Not Available | Positive | 2800257 - 2800760 | 18002.3 |
| ps-10 peptidase s37 | SAMN05421671_2823 | Not Available | Positive | 2800860 - 2802308 | 53725.7 |
| 3-oxo-5alpha-steroid 4-dehydrogenase | SAMN05421671_2824 | Not Available | Positive | 2802406 - 2803878 | 51074.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
