Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05421671_2733 | Not Available | Negative | 2715208 - 2715990 | 27436.5 |
| predicted atp-dependent carboligase, atp-grasp superfamily | SAMN05421671_2734 | Not Available | Negative | 2716004 - 2716849 | 31125.6 |
| methionine synthase (b12-dependent) | SAMN05421671_2735 | Not Available | Positive | 2716990 - 2720769 | 136656.0 |
| helix-turn-helix | SAMN05421671_2736 | Not Available | Positive | 2720874 - 2721398 | 20164.3 |
| hypothetical protein | SAMN05421671_2737 | Not Available | Positive | 2721398 - 2721982 | 20984.8 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421671_2738 | Not Available | Positive | 2722000 - 2722659 | 23325.0 |
| putative recb family exonuclease | SAMN05421671_2739 | Not Available | Negative | 2722631 - 2723539 | 33269.8 |
| zn-dependent protease (includes spoivfb) | SAMN05421671_2740 | Not Available | Positive | 2723642 - 2724727 | 38045.6 |
| trna (adenine-58-n(1)-) methyltransferase | SAMN05421671_2741 | Not Available | Positive | 2724762 - 2725703 | 33934.3 |
| proteasome-associated atpase | SAMN05421671_2742 | Not Available | Positive | 2725764 - 2727527 | 65122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
