Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | SAMN05421671_2623 | Not Available | Positive | 2627039 - 2627815 | 28588.1 |
| hypothetical protein | SAMN05421671_2624 | Not Available | Positive | 2627842 - 2628882 | 37128.2 |
| transcriptional regulator, tetr family | SAMN05421671_2625 | Not Available | Negative | 2628943 - 2629590 | 22367.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421671_2626 | Not Available | Positive | 2629683 - 2630468 | 26311.3 |
| p-aminobenzoate n-oxygenase aurf | SAMN05421671_2627 | Not Available | Positive | 2630651 - 2631619 | 36586.1 |
| cation diffusion facilitator family transporter | SAMN05421671_2628 | Not Available | Negative | 2631616 - 2632596 | 34785.8 |
| transcriptional regulator, paax family | SAMN05421671_2629 | Not Available | Negative | 2632593 - 2633327 | 26437.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421671_2630 | Not Available | Positive | 2633462 - 2634268 | 27757.3 |
| acyl-coa thioesterase | SAMN05421671_2631 | Not Available | Positive | 2634265 - 2634642 | 12727.0 |
| cytochrome p450 | SAMN05421671_2632 | Not Available | Negative | 2634662 - 2635870 | 43027.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
