Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative flavoprotein involved in k+ transport | SAMN05421671_2560 | Not Available | Positive | 2558760 - 2560529 | 63343.3 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05421671_2561 | Not Available | Positive | 2560700 - 2561845 | 39916.0 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05421671_2562 | Not Available | Positive | 2561942 - 2562721 | 27686.4 |
| xylose abc transporter membrane protein | SAMN05421671_2563 | Not Available | Positive | 2562718 - 2563935 | 41536.8 |
| transcriptional regulator, tetr family | SAMN05421671_2564 | Not Available | Positive | 2563980 - 2566604 | 95779.5 |
| (+)-trans-carveol dehydrogenase | SAMN05421671_2565 | Not Available | Positive | 2566607 - 2567440 | 28994.6 |
| pseudouridine-5'-phosphate glycosidase | SAMN05421671_2566 | Not Available | Negative | 2567437 - 2568369 | 32155.6 |
| pseudouridine kinase | SAMN05421671_2567 | Not Available | Negative | 2568366 - 2569478 | 38273.8 |
| alkaline phosphatase d | SAMN05421671_2568 | Not Available | Positive | 2569593 - 2571281 | 60935.7 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05421671_2569 | Not Available | Negative | 2571274 - 2572917 | 58765.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
