Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase | SAMN05421671_2163 | Not Available | Positive | 2144918 - 2145892 | 33378.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421671_2164 | Not Available | Positive | 2145892 - 2146635 | 24405.1 |
| predicted peroxiredoxin | SAMN05421671_2165 | Not Available | Negative | 2146659 - 2147024 | 12789.5 |
| regulatory protein, luxr family | SAMN05421671_2166 | Not Available | Negative | 2147168 - 2148211 | 38031.5 |
| glutamate carboxypeptidase | SAMN05421671_2167 | Not Available | Positive | 2148319 - 2149437 | 38101.4 |
| predicted acetyltransferase, gnat superfamily | SAMN05421671_2168 | Not Available | Positive | 2149434 - 2150288 | 30328.1 |
| o-succinylbenzoate synthase | SAMN05421671_2169 | Not Available | Positive | 2150285 - 2151400 | 39336.1 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05421671_2170 | Not Available | Positive | 2151411 - 2153114 | 60107.1 |
| hypothetical protein | SAMN05421671_2171 | Not Available | Positive | 2153124 - 2153339 | 7809.4 |
| prolyl oligopeptidase | SAMN05421671_2172 | Not Available | Negative | 2153336 - 2156314 | 105131.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
