Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421671_2133 | Not Available | Negative | 2112435 - 2113568 | 38848.0 |
| 4-carboxymuconolactone decarboxylase | SAMN05421671_2134 | Not Available | Negative | 2113604 - 2114212 | 21539.4 |
| transmembrane protein of unknown function | SAMN05421671_2135 | Not Available | Positive | 2114341 - 2116131 | 65952.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05421671_2136 | Not Available | Positive | 2116128 - 2117639 | 53255.4 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN05421671_2137 | Not Available | Positive | 2117605 - 2118897 | 47317.0 |
| phytoene dehydrogenase-related protein | SAMN05421671_2138 | Not Available | Positive | 2118998 - 2120425 | 49167.2 |
| deoxyribodipyrimidine photo-lyase | SAMN05421671_2139 | Not Available | Positive | 2120450 - 2121802 | 50001.9 |
| alpha/beta hydrolase family protein | SAMN05421671_2140 | Not Available | Positive | 2121795 - 2122421 | 22495.3 |
| dna-binding transcriptional regulator, frmr family | SAMN05421671_2141 | Not Available | Negative | 2122426 - 2122686 | 9194.39 |
| uncharacterized conserved protein, duf302 family | SAMN05421671_2142 | Not Available | Negative | 2122670 - 2123146 | 16527.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
