Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421671_2062 | Not Available | Negative | 2033194 - 2034309 | 38547.7 |
| membrane protein involved in the export of o-antigen and teichoic acid | SAMN05421671_2063 | Not Available | Negative | 2034291 - 2037113 | 95745.6 |
| hypothetical protein | SAMN05421671_2064 | Not Available | Negative | 2037119 - 2037754 | 22698.3 |
| cellulase (glycosyl hydrolase family 5) | SAMN05421671_2065 | Not Available | Negative | 2037760 - 2038920 | 42283.7 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421671_2066 | Not Available | Negative | 2038917 - 2039726 | 29175.6 |
| hypothetical protein | SAMN05421671_2067 | Not Available | Negative | 2039723 - 2040289 | 19710.6 |
| o-antigen ligase | SAMN05421671_2068 | Not Available | Negative | 2040283 - 2041665 | 46619.7 |
| glycosyl transferases group 1 | SAMN05421671_2069 | Not Available | Negative | 2041662 - 2043791 | 73802.8 |
| chromosome partitioning atpase, mrp family, contains fe-s cluster | SAMN05421671_2070 | Not Available | Negative | 2043842 - 2045182 | 47217.7 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421671_2071 | Not Available | Negative | 2045194 - 2046234 | 37271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
