Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase (oxaloacetate-decarboxylating) | SAMN05421671_2042 | Not Available | Negative | 2014360 - 2015544 | 40635.5 |
| nickel-type superoxide dismutase maturation protease | SAMN05421671_2043 | Not Available | Negative | 2015551 - 2015913 | 13021.7 |
| nickel superoxide dismutase | SAMN05421671_2044 | Not Available | Positive | 2015972 - 2016385 | 15331.4 |
| hypothetical protein | SAMN05421671_2045 | Not Available | Positive | 2016640 - 2017401 | 26022.0 |
| hypothetical protein | SAMN05421671_2046 | Not Available | Positive | 2017638 - 2018213 | 20115.2 |
| serine/threonine-protein kinase rsbw | SAMN05421671_2047 | Not Available | Positive | 2018394 - 2018810 | 14363.8 |
| rna polymerase, sigma 28 subunit, sigd/flia/whig | SAMN05421671_2048 | Not Available | Positive | 2018807 - 2019628 | 30223.8 |
| hypothetical protein | SAMN05421671_2049 | Not Available | Negative | 2019604 - 2019981 | 12968.8 |
| transcription factor whib | SAMN05421671_2050 | Not Available | Positive | 2020249 - 2020503 | 9601.39 |
| histidine kinase | SAMN05421671_2051 | Not Available | Negative | 2020681 - 2022165 | 53149.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
