Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
136 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN05421671_1961 | Not Available | Negative | 1932842 - 1933993 | 40495.7 |
| membrane-associated protease rsep, regulator of rpoe activity | SAMN05421671_1962 | Not Available | Negative | 1934025 - 1935383 | 48454.0 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05421671_1963 | Not Available | Negative | 1935380 - 1936483 | 38728.2 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421671_1964 | Not Available | Positive | 1936530 - 1937654 | 40022.9 |
| lao/ao transport system kinase | SAMN05421671_1965 | Not Available | Negative | 1937651 - 1938574 | 32345.6 |
| acetyl-coa c-acetyltransferase | SAMN05421671_1966 | Not Available | Negative | 1938648 - 1939847 | 40285.9 |
| methylmalonyl-coa epimerase | SAMN05421671_1967 | Not Available | Positive | 1939949 - 1940452 | 18034.4 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05421671_1968 | Not Available | Negative | 1940641 - 1941480 | 27885.4 |
| sensor histidine kinase inhibitor, kipi family | SAMN05421671_1969 | Not Available | Negative | 1941492 - 1942133 | 22316.0 |
| upf0271 protein | SAMN05421671_1970 | Not Available | Negative | 1942130 - 1942900 | 25724.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
