Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Streptosporangiales
Family
Thermomonosporaceae
Genus
Actinomadura
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Streptosporangiales |
| Family | Thermomonosporaceae |
| Genus | Actinomadura |
| Species | Actinomadura madurae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426572 bp
Thymine Count
1434448 bp
Guanine Count
3699798 bp
Cytosine Count
3693706 bp
Genome Length
10255144 bp
Protein-coding Genes
9401 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04489713_115220 | Not Available | Negative | 7646930 - 7647625 | 23862.7 |
| pucr c-terminal helix-turn-helix domain-containing protein | SAMN04489713_115221 | Not Available | Positive | 7647821 - 7648861 | 36907.9 |
| s-adenosyl methyltransferase | SAMN04489713_115222 | Not Available | Positive | 7649005 - 7649817 | 29561.1 |
| helix-turn-helix domain-containing protein | SAMN04489713_115223 | Not Available | Positive | 7649915 - 7650820 | 34413.5 |
| squalene synthase hpnc | SAMN04489713_115224 | Not Available | Positive | 7651126 - 7651983 | 31411.6 |
| farnesyl-diphosphate farnesyltransferase | SAMN04489713_115225 | Not Available | Positive | 7651993 - 7652853 | 31180.2 |
| squalene-associated fad-dependent desaturase | SAMN04489713_115226 | Not Available | Positive | 7652850 - 7654208 | 47893.3 |
| geranylgeranyl diphosphate synthase, type i | SAMN04489713_115227 | Not Available | Positive | 7654205 - 7655215 | 35799.4 |
| squalene-hopene/tetraprenyl-beta-curcumene cyclase | SAMN04489713_115228 | Not Available | Positive | 7655251 - 7657116 | 68135.5 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04489713_115229 | Not Available | Positive | 7657113 - 7658597 | 51086.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.