Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Streptosporangiales
Family
Thermomonosporaceae
Genus
Actinomadura
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Streptosporangiales |
| Family | Thermomonosporaceae |
| Genus | Actinomadura |
| Species | Actinomadura madurae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426572 bp
Thymine Count
1434448 bp
Guanine Count
3699798 bp
Cytosine Count
3693706 bp
Genome Length
10255144 bp
Protein-coding Genes
9401 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase, alpha subunit | SAMN04489713_106266 | Not Available | Positive | 4375990 - 4376541 | 19474.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN04489713_106267 | Not Available | Positive | 4376531 - 4377703 | 39703.4 |
| 3-oxoadipate enol-lactonase | SAMN04489713_106268 | Not Available | Positive | 4377700 - 4378476 | 26321.4 |
| 4-carboxymuconolactone decarboxylase | SAMN04489713_106269 | Not Available | Positive | 4378473 - 4378862 | 14436.2 |
| dna-binding transcriptional regulator, iclr family | SAMN04489713_106270 | Not Available | Positive | 4378891 - 4379703 | 29089.4 |
| p-hydroxybenzoate 3-monooxygenase | SAMN04489713_106271 | Not Available | Positive | 4379763 - 4380920 | 42248.0 |
| pap2 superfamily protein | SAMN04489713_106272 | Not Available | Positive | 4381113 - 4381940 | 30304.7 |
| cyanophycin synthetase | SAMN04489713_106273 | Not Available | Negative | 4381897 - 4384536 | 91260.2 |
| cyanophycinase | SAMN04489713_106274 | Not Available | Negative | 4384539 - 4385372 | 28639.4 |
| regulatory protein, tetr family | SAMN04489713_106275 | Not Available | Positive | 4385465 - 4386112 | 23043.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.