Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Streptosporangiales
Family
Thermomonosporaceae
Genus
Actinomadura
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Streptosporangiales |
| Family | Thermomonosporaceae |
| Genus | Actinomadura |
| Species | Actinomadura madurae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1426572 bp
Thymine Count
1434448 bp
Guanine Count
3699798 bp
Cytosine Count
3693706 bp
Genome Length
10255144 bp
Protein-coding Genes
9401 genes
Non-Coding Genes
87 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-peptidoglycan transpeptidase ykud, erfk/ybis/ycfs/ynhg family | SAMN04489713_105156 | Not Available | Negative | 3756962 - 3757678 | 25561.3 |
| hypothetical protein | SAMN04489713_105157 | Not Available | Negative | 3757812 - 3758594 | 26657.3 |
| short chain enoyl-coa hydratase | SAMN04489713_105158 | Not Available | Negative | 3758654 - 3759466 | 27970.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04489713_105159 | Not Available | Negative | 3759474 - 3760247 | 26433.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04489713_105160 | Not Available | Positive | 3760379 - 3761260 | 31888.8 |
| dna topoisomerase ib | SAMN04489713_105161 | Not Available | Positive | 3761260 - 3762273 | 37708.5 |
| predicted phosphoesterase | SAMN04489713_105162 | Not Available | Negative | 3762381 - 3763142 | 26430.1 |
| bon domain-containing protein | SAMN04489713_105163 | Not Available | Negative | 3763139 - 3763384 | 8946.44 |
| uncharacterised nucleotidyltransferase | SAMN04489713_105164 | Not Available | Negative | 3763401 - 3764036 | 22146.4 |
| glycosyl hydrolase family 1 | SAMN04489713_105165 | Not Available | Negative | 3764103 - 3765485 | 51755.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.