Streptomyces griseoruber str. DSM 40281

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces griseoruber str. DSM 40281 is a Gram-positive bacterium that thrives optimally at a temperature of 29.0°C. This species belongs to the genus Streptomyces, which is renowned for its filamentous growth and complex life cycle. As a member of the Actinobacteria phylum, S. griseoruber exhibits the characteristic mycelial structure typical of this group, which is pivotal for its role in soil ecosystems. The Gram-positive nature of S. griseoruber indicates a thick peptidoglycan layer in its cell wall, which is a hallmark of its resilience and adaptability to various environmental conditions. This structural feature also plays a crucial role in the bacterium's interactions with its surroundings, including potential contributions to soil health and nutrient cycling. Understanding the optimal growth temperature of 29.0°C can provide insights into the ecological niches that S. griseoruber may occupy. This temperature preference suggests that it may thrive in temperate environments, where it can participate actively in the decomposition of organic matter. The ecological role of S. griseoruber in nutrient recycling and organic matter degradation highlights its potential importance in maintaining soil fertility and health, essential for sustainable agricultural practices. Further research into this strain may uncover additional functional capabilities and biotechnological applications, particularly in the production of bioactive compounds.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces griseoruber
StrainDSM 40281

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces griseoruber str. DSM 40281
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces griseoruber strain DSM 40281 PRJNA299232_c169, whole

Gene Summary

Adenine Count

1439042 bp

Thymine Count

1442723 bp

Guanine Count

3644633 bp

Cytosine Count

3644927 bp

Genome Length

10171325 bp

Protein-coding Genes

8485 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyltransferase type 11AQJ64_11380Not AvailablePositive2584346 - 258502023838.1
fic family toxin-antitoxin system, toxin componentAQJ64_11385Not AvailableNegative2585034 - 258540813408.1
hypothetical proteinAQJ64_11390Not AvailableNegative2585413 - 25856558917.31
abc transporterAQJ64_11395Not AvailablePositive2585777 - 258656828207.7
hypothetical proteinAQJ64_11400Not AvailablePositive2586573 - 258914088032.7
gcn5 family acetyltransferaseAQJ64_11405Not AvailablePositive2589344 - 258976915686.7
hypothetical proteinAQJ64_11410Not AvailablePositive2589967 - 259130146728.9
hypothetical proteinAQJ64_11415Not AvailablePositive2591298 - 259231136218.6
gdsl family lipaseAQJ64_11420Not AvailablePositive2592393 - 259317228367.2
adenylosuccinate lyaseAQJ64_11425Not AvailablePositive2593297 - 259473951874.6

Displaying genes 2211 – 2220 of 8578 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

8 records
Metabolite IDMetabolite nameStructureCAS number
BASm0011719bisucaberinC18H32N4O6Chemical structure of bisucaberinNot available
Average400.476Da
Monoisotopic400.232184766Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014614DesmethylenylnocardamineC26H46N6O9Chemical structure of DesmethylenylnocardamineNULL
Average586.687Da
Monoisotopic586.332627085Da
BASm0016063BonactinC21H36O7Chemical structure of BonactinNULL
Average400.512Da
Monoisotopic400.246103499Da
BASm0016220Chromomycin A3C57H82O26Chemical structure of Chromomycin A3NULL
Average1183.257Da
Monoisotopic1182.50943276Da
BASm0016958Desferrioxamine EC27H48N6O9Chemical structure of Desferrioxamine ENULL
Average600.714Da
Monoisotopic600.34827715Da
BASm0016967Desferrioxamine GC27H50N6O10Chemical structure of Desferrioxamine GNULL
Average618.729Da
Monoisotopic618.358841834Da
BASm0017148SchizokinenC16H28N4O9Chemical structure of SchizokinenNULL
Average420.419Da
Monoisotopic420.185628498Da

Displaying 1–8 of 8 metabolites

Health Effects

No health effects information available for this bacterium.