Streptomyces scabiei

Gram-positiveTailedMotileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

Streptomyces scabiei is a Gram-positive, aerobic bacterium characterized by its tailed morphology and ability to undergo sporulation. This microbe is part of the diverse genus Streptomyces, which is renowned for its role in soil ecosystems and its capacity to produce a wide range of bioactive compounds. As a terrestrial inhabitant, S. scabiei thrives in soil environments, where it contributes to the complex interactions within microbial communities. The sporulating nature of S. scabiei enables it to survive in varying environmental conditions, allowing it to persist in terrestrial habitats. This trait is essential for its dissemination and colonization capabilities. The tailed shape of the bacterium may facilitate its motility or interaction with other microorganisms in the soil matrix, although specific functions associated with this morphology are not well-documented. Overall, Streptomyces scabiei exemplifies the ecological significance of soil-dwelling microorganisms, particularly in nutrient cycling and the development of soil health. Its ability to sporulate and adapt to aerobic conditions underscores its potential role in influencing microbial diversity and dynamics within terrestrial ecosystems. Understanding the traits and behaviors of such microbes can provide insights into their contributions to soil fertility and plant health, representing an important area for further research.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces scabiei
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeTailed
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces scabiei
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatTerrestrial
Biotic relationshipFree living
Host(s)Viridiplantae, Solanum tuberosum, Daucus carota
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityPlant

Genome Summary

Streptomyces scabiei DNA, scaffold: NODE_147_cov_186.853, strain:

Gene Summary

Adenine Count

1418526 bp

Thymine Count

1427721 bp

Guanine Count

3592426 bp

Cytosine Count

3562368 bp

Genome Length

10001327 bp

Protein-coding Genes

8629 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSsS58_00443Not AvailableNegative482488 - 48332430527.8
oxygen-dependent choline dehydrogenaseSsS58_00444Not AvailableNegative483328 - 48499861529.2
pectin degradation repressor protein kdgrSsS58_00445Not AvailablePositive485209 - 48594626491.2
3-phenylpropionate/cinnamic acid dioxygenase subunit alphaSsS58_00446Not AvailableNegative485948 - 48707842321.9
benzene 1,2-dioxygenase system ferredoxin--nad(+) reductase subunitSsS58_00447Not AvailableNegative487208 - 48835639612.2
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunitSsS58_00448Not AvailableNegative488368 - 48872712840.1
glycine betaine transporter betpSsS58_00449Not AvailableNegative489015 - 49076361050.5
putative formate dehydrogenaseSsS58_00450Not AvailableNegative490907 - 49322284249.0
s-(hydroxymethyl)mycothiol dehydrogenaseSsS58_00451Not AvailableNegative493549 - 49463437679.3
phosphoserine phosphatase rsbuSsS58_00452Not AvailableNegative494835 - 49722285509.4

Displaying genes 441 – 450 of 8629 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Scab lesionsCausesPMC11609053
Potato common scabCausesPMC11818755
Common scabCausesPMC11818755
Potato common scab (cs)CausesPMC11818755
Common scabCausesPMC12542781
Common scab diseaseCausesPMC12648119
CsCausesPMC12648119
Common scabCausesPMC12879927
Common and acid scabCausesPMC12879927
Potato scabCausesPMC4664631

Displaying health effects 1 – 10 of 14 in total