Rhodococcus ruber

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus ruber is a Gram-positive bacterium commonly found in soil environments. This microbe is characterized by its rod-shaped morphology and its ability to thrive in diverse ecological niches, particularly in terrestrial habitats. R. ruber exhibits notable metabolic versatility, which enables it to utilize a wide range of organic compounds as carbon sources, thereby contributing to soil health and nutrient cycling. The organism's adaptation to soil environments may be linked to its capability for biodegradation, allowing it to break down various xenobiotic compounds, including hydrocarbons and other pollutants. This trait not only highlights its potential role in bioremediation but also underscores its significance in maintaining soil quality and ecological balance. R. ruber's presence in soil ecosystems suggests a potential symbiotic relationship with plants and other soil microorganisms, which can enhance nutrient availability and promote plant growth. The bacterium's ability to survive in varying environmental conditions further emphasizes its ecological resilience and importance in soil microbiology. Overall, R. ruber serves as a key player in the intricate web of soil microbial communities, contributing to both ecological stability and environmental sustainability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus ruber
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus ruber

Accession NumberNZ_CP023712.1

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

144 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
mu transposase domain-containing proteinYT1_RS00065Not Available-9599 - 1095449398.5
alpha/beta fold hydrolaseYT1_RS00070Not Available+11117 - 1176723630.1
hypothetical proteinYT1_RS26965Not Available-11918 - 120826242.43
is5/is1182 family transposaseYT1_RS27870Not Available-12132 - 123056588.0
toll/interleukin-1 receptor domain-containing proteinYT1_RS00075Not Available-12842 - 1357025141.3
hypothetical proteinYT1_RS00080Not Available-14101 - 1471222605.1
hypothetical proteinYT1_RS00090Not Available+15586 - 1639830479.4
helix-turn-helix domain-containing proteinYT1_RS00095Not Available+16395 - 1756442743.1
transposase family proteinYT1_RS00100Not Available+17835 - 1866529948.2
hypothetical proteinYT1_RS00105Not Available+18757 - 1941624416.0

Displaying genes 11 – 20 of 144 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites