Mycolicibacterium chubuense str. DSM 44219

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium chubuense
StrainDSM 44219

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium chubuense strain DSM 44219

Gene Summary

Adenine Count

918025 bp

Thymine Count

913004 bp

Guanine Count

2051602 bp

Cytosine Count

2062102 bp

Genome Length

5945009 bp

Protein-coding Genes

5700 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome b6-f complex iron-sulfur subunitMCHUDSM44219_00649Not AvailableNegative666979 - 66741614054.4
lipoprotein lpqb precursorMCHUDSM44219_00650A1T5X7Negative667443 - 66920361097.7
sensor histidine kinase mtrbMCHUDSM44219_00651A0QTK3Negative669200 - 67084359255.6
dna-binding response regulator mtraMCHUDSM44219_00652A0QTK2Negative670840 - 67152625334.0
hypothetical proteinMCHUDSM44219_00653Not AvailableNegative671605 - 67224323081.5
thymidylate kinaseMCHUDSM44219_00654P9WKE0Negative672353 - 67299122545.5
monoterpene epsilon-lactone hydrolaseMCHUDSM44219_00655I6Y2J4Positive673045 - 67435245939.8
glycerophosphoryl diester phosphodiesterase precursorMCHUDSM44219_00656Not AvailablePositive674410 - 67542335563.5
hypothetical proteinMCHUDSM44219_00657Not AvailableNegative675447 - 67594417959.4
adenosylhomocysteinaseMCHUDSM44219_00658A3PW97Negative675946 - 67741253731.9

Displaying genes 651 – 660 of 5752 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

506 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 506 metabolites

Health Effects

No health effects information available for this bacterium.