Mycolicibacterium chubuense str. DSM 44219

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium chubuense
StrainDSM 44219

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium chubuense strain DSM 44219

Gene Summary

Adenine Count

918025 bp

Thymine Count

913004 bp

Guanine Count

2051602 bp

Cytosine Count

2062102 bp

Genome Length

5945009 bp

Protein-coding Genes

5700 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
general stress protein 39MCHUDSM44219_00408P80873Positive407764 - 40853426785.7
1,2-epoxyphenylacetyl-coa isomeraseMCHUDSM44219_00409Q7U004Negative408617 - 40941427665.2
hth-type transcriptional repressor fabrMCHUDSM44219_00410A7FD11Negative409439 - 41014326438.6
stearoyl-coa 9-desaturase electron transfer partnerMCHUDSM44219_00411Not AvailablePositive410215 - 41127038011.1
stearoyl-coa 9-desaturaseMCHUDSM44219_00412P9WNZ2Positive411315 - 41243042173.9
hypothetical proteinMCHUDSM44219_00413Not AvailableNegative412466 - 41340435823.9
endonuclease 8 1MCHUDSM44219_00414P64157Negative413531 - 41429227721.4
atp-dependent rna helicase dbpaMCHUDSM44219_00415P30015Negative414292 - 418821161597.0
cyclic-di-gmp-binding biofilm dispersal mediator proteinMCHUDSM44219_00416P39333Negative418868 - 41965026355.0
serine/threonine-protein kinase pknkMCHUDSM44219_00417A4WFK6Positive419862 - 42206377876.8

Displaying genes 411 – 420 of 5752 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

506 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000272(E)-4-coumarateC9H7O3Chemical structure of (E)-4-coumarateNot available
Average163.1501Da
Monoisotopic163.0395191Da
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da

Displaying 1–10 of 506 metabolites

Health Effects

No health effects information available for this bacterium.