Bifidobacterium kimbladii

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium kimbladii
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbee bread; bee pollen; brood; brood comb; digestive tract; fresh honey; hindgut; honey; honey crop
Biotic relationshipNot Available
Host(s)Homo sapiens, Apinae, Apis mellifera
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium asteroides strain Bin2 contig018, whole genome

Gene Summary

Adenine Count

408124 bp

Thymine Count

413416 bp

Guanine Count

634104 bp

Cytosine Count

631961 bp

Genome Length

2087605 bp

Protein-coding Genes

1583 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter, permease proteinJF69_10810Q9KTJ6Negative1420305 - 142098524386.8
abc transporter, atp binding proteinJF69_10820Q03A07Negative1420982 - 142203438337.1
phosphoribosylglycinamide formyltransferase 2JF69_10830A1A0S3Positive1422176 - 142347746238.8
phosphoribosylaminoimidazole-succinocarboxamide synthaseJF69_10840B8DTV0Positive1423570 - 142430727483.7
phosphoribosylformylglycinamidine synthaseJF69_10850Q9HJA4Positive1424387 - 1428166136881.0
amidophosphoribosyltransferaseJF69_10860Q5HH14Positive1428184 - 142968954317.7
phosphoribosylformylglycinamidine cyclo-ligaseJF69_10870B8DTT6Positive1429735 - 143078737564.0
phosphoribosylamine--glycine ligaseJF69_10880Q5XEF0Positive1430803 - 143207444598.2
phosphoglycerol transferase family proteinJF69_10890P72302Negative1432071 - 143424881114.0
abc transporter, extracellular substrate binding protein, putative the mn2+/zn2+ transporterJF69_10900Not AvailableNegative1434374 - 143529433345.1

Displaying genes 1081 – 1090 of 1632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

132 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da
BASm0000738D-lyxoseC5H10O5Chemical structure of D-lyxose1114-34-7
Average150.1299Da
Monoisotopic150.05282343Da
BASm0000848hexanoateC6H11O2Chemical structure of hexanoateNot available
Average115.1503Da
Monoisotopic115.075904596Da
BASm00008763-hydroxypyruvateC3H3O4Chemical structure of 3-hydroxypyruvateNot available
Average103.054Da
Monoisotopic103.003682157Da

Displaying 1–10 of 132 metabolites

Health Effects

No health effects information available for this bacterium.