Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Actinomyces odontolyticus strain NCTC9935 genome assembly, contig:
Gene Summary
Adenine Count
424429 bp
Thymine Count
437952 bp
Guanine Count
802891 bp
Cytosine Count
789154 bp
Genome Length
2454426 bp
Protein-coding Genes
2061 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | CYJ22_00865 | Not Available | Negative | 198522 - 199085 | 20231.5 |
| hypothetical protein | CYJ22_00870 | Not Available | Positive | 199443 - 199739 | 10651.8 |
| transcription antitermination factor nusb | CYJ22_00875 | Not Available | Negative | 199813 - 200433 | 22557.4 |
| elongation factor p | CYJ22_00880 | Not Available | Negative | 200433 - 200996 | 20680.5 |
| shikimate kinase | CYJ22_00885 | Not Available | Negative | 201021 - 201545 | 18516.2 |
| 3-dehydroquinate synthase | CYJ22_00890 | Not Available | Negative | 201542 - 202624 | 38154.8 |
| shikimate kinase | CYJ22_00895 | Not Available | Negative | 202621 - 203130 | 17765.2 |
| chorismate synthase | CYJ22_00900 | Not Available | Negative | 203127 - 204338 | 42019.9 |
| peptidylprolyl isomerase | CYJ22_00905 | Not Available | Negative | 204399 - 205439 | 35528.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 205821 - 205938 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

