Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Schaalia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Actinomycetales |
| Family | Actinomycetaceae |
| Genus | Schaalia |
| Species | Schaalia odontolytica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Host gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Actinomyces odontolyticus strain NCTC9935 genome assembly, contig:
Gene Summary
Adenine Count
424429 bp
Thymine Count
437952 bp
Guanine Count
802891 bp
Cytosine Count
789154 bp
Genome Length
2454426 bp
Protein-coding Genes
2061 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CYJ22_00265 | Not Available | Negative | 58225 - 58470 | 9141.55 |
| histidine phosphatase | CYJ22_00270 | Not Available | Positive | 58503 - 58985 | 17266.2 |
| yebc/pmpr family dna-binding transcriptional regulator | CYJ22_00275 | Not Available | Positive | 59134 - 59895 | 27055.5 |
| pyridoxal 5'-phosphate synthase lyase subunit pdxs | CYJ22_00280 | Not Available | Positive | 59898 - 60800 | 31961.4 |
| pyridoxal 5'-phosphate synthase glutaminase subunit pdxt | CYJ22_00285 | Not Available | Positive | 60794 - 61387 | 20973.1 |
| crossover junction endodeoxyribonuclease ruvc | CYJ22_00290 | Not Available | Positive | 61387 - 62016 | 21930.5 |
| holliday junction branch migration protein ruva | CYJ22_00295 | Not Available | Positive | 62072 - 62677 | 20564.9 |
| holliday junction branch migration dna helicase ruvb | CYJ22_00300 | Not Available | Positive | 62670 - 63722 | 37419.0 |
| preprotein translocase subunit yajc | CYJ22_00305 | Not Available | Positive | 63903 - 64316 | 15524.2 |
| protein translocase subunit secd | CYJ22_00310 | Not Available | Positive | 64343 - 66274 | 67999.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Actinomyces odontolyticus sepsis | Causes | PMC10294425 |
| Sepsis | Causes | PMC10294425 |
| Chronic granulomatous infection | Causes | PMC10843370 |
| Empyema | Causes | PMC10843370 |
| Lung infections | Causes | PMC10843370 |
| Abdominal cavity infections | Causes | PMC10843370 |
| Blood infections | Causes | PMC10843370 |
| Brain infections | Causes | PMC10843370 |
| Pericardial cavity infections | Causes | PMC10843370 |
| Bone marrow infections | Causes | PMC10843370 |

